PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe1G411400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 250aa    MW: 27851.9 Da    PI: 8.5902
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe1G411400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-1163109354
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        ++h+++E+rRR+riN  +++Lr+llP a      K++Ka+ L  +v+ +k+L
  Aqcoe1G411400.1.p  63 VSHSQAEKRRRERINGHLSTLRRLLPRA-----DKMDKAALLGSVVNQVKEL 109
                        68*************************9.....8********9999988887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.06E-1257112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.71660109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-963109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-963112No hitNo description
Gene3DG3DSA:4.10.280.109.6E-1264112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-966115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550217.44E-7153214No hitNo description
Gene3DG3DSA:3.30.70.2605.9E-7153200No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MEECSRLGWP EEANLFQYHE YNNVPFILPW PPQTSMSSIF PAAHGGYLSS SASVNDRTAA  60
SSVSHSQAEK RRRERINGHL STLRRLLPRA DKMDKAALLG SVVNQVKELK RKAIEVGKLY  120
TIPSDVDEVF VDRDNNEDHS NIDNKDCIVF KASVCCEDRP ELLTDLNQAL NGLKLRIVKA  180
DMATLGGRVT NVMILCTNES EDKVCLSSLK QSIKVVLSRV ASMSMPSVRA FSSKRQRMLL  240
PSNYSHLSL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010253805.12e-87PREDICTED: transcription factor bHLH51-like
TrEMBLD7T4M29e-75D7T4M2_VITVI; Putative uncharacterized protein
STRINGVIT_13s0067g01350.t013e-74(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-45bHLH family protein